Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DQO56_RS21030 | Not Available | + | 4562519 - 4563382 | 29601.8 |
| type i glutamate--ammonia ligase | DQO56_RS21035 | Not Available | - | 4563622 - 4565058 | 53672.8 |
| rdd family protein | DQO56_RS21040 | Not Available | + | 4565269 - 4565745 | 16784.6 |
| sdr family nad(p)-dependent oxidoreductase | DQO56_RS21045 | Not Available | - | 4565800 - 4566468 | 22979.2 |
| winged helix-turn-helix transcriptional regulator | DQO56_RS21050 | Not Available | + | 4566614 - 4567000 | 13988.8 |
| duf4191 domain-containing protein | DQO56_RS21055 | Not Available | - | 4567161 - 4567901 | 26929.4 |
| lipoyl synthase | DQO56_RS21060 | Not Available | - | 4567981 - 4568991 | 37591.7 |
| lipoyl(octanoyl) transferase lipb | DQO56_RS21065 | Not Available | - | 4569047 - 4569826 | 27649.7 |
| 2-oxoglutarate dehydrogenase, e2 component, dihydrolipoamide succinyltransferase | DQO56_RS21070 | Not Available | - | 4569957 - 4572074 | 72789.0 |
| leucyl aminopeptidase | DQO56_RS21075 | Not Available | - | 4572357 - 4573868 | 51588.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
