Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| comea family dna-binding protein | DQO56_RS20385 | Not Available | + | 4435705 - 4436541 | 27690.7 |
| comec/rec2 family competence protein | DQO56_RS20390 | Not Available | + | 4436538 - 4438886 | 79135.4 |
| dna polymerase iii subunit delta | DQO56_RS20395 | Not Available | + | 4438883 - 4439854 | 32895.2 |
| 30s ribosomal protein s20 | DQO56_RS20400 | Not Available | - | 4439995 - 4440255 | 9312.25 |
| circularly permuted type 2 atp-grasp protein | DQO56_RS20405 | Not Available | + | 4440560 - 4442092 | 56262.0 |
| alpha-e domain-containing protein | DQO56_RS20410 | Not Available | + | 4442092 - 4443066 | 36642.4 |
| transglutaminase family protein | DQO56_RS20415 | Not Available | + | 4443075 - 4443905 | 30349.4 |
| aquaporin | DQO56_RS20420 | Not Available | + | 4444008 - 4444895 | 30779.2 |
| type ii toxin-antitoxin system pemk/mazf family toxin | DQO56_RS20425 | Not Available | - | 4445010 - 4445597 | 21082.8 |
| translation elongation factor 4 | DQO56_RS20430 | Not Available | + | 4445693 - 4447582 | 69499.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
