Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf5302 domain-containing protein | DQO56_RS21360 | Not Available | - | 4416264 - 4416431 | 6525.61 |
| pyridoxamine 5'-phosphate oxidase family protein | DQO56_RS20290 | Not Available | - | 4416510 - 4417022 | 19080.8 |
| iclr family transcriptional regulator | DQO56_RS20295 | Not Available | - | 4417066 - 4417767 | 24653.9 |
| 3-isopropylmalate dehydratase large subunit | DQO56_RS20300 | Not Available | + | 4417895 - 4419313 | 50350.0 |
| 3-isopropylmalate dehydratase small subunit | DQO56_RS20305 | Not Available | + | 4419339 - 4419935 | 22047.2 |
| hu family dna-binding protein | DQO56_RS20310 | Not Available | + | 4420106 - 4420864 | 25715.3 |
| nudix hydrolase | DQO56_RS20315 | Not Available | - | 4421082 - 4422047 | 35165.8 |
| rna degradosome polyphosphate kinase | DQO56_RS20320 | Not Available | - | 4422061 - 4424277 | 81483.2 |
| 2-phospho-l-lactate guanylyltransferase | DQO56_RS20325 | Not Available | - | 4424274 - 4424996 | 24713.5 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DQO56_RS20330 | Not Available | + | 4425137 - 4426135 | 34278.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
