Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc1 kinase family protein | DQO56_RS19735 | Not Available | - | 4294164 - 4295489 | 48325.6 |
| tomm precursor leader peptide-binding protein | DQO56_RS19740 | Not Available | - | 4295486 - 4296418 | 33302.2 |
| zinc-dependent metalloprotease | DQO56_RS19745 | Not Available | - | 4296512 - 4297927 | 50194.3 |
| pdz domain-containing protein | DQO56_RS19750 | Not Available | + | 4298015 - 4299037 | 35103.7 |
| ppa1309 family protein | DQO56_RS19755 | Not Available | - | 4299044 - 4299646 | 21298.7 |
| upf0182 family protein | DQO56_RS19760 | Not Available | + | 4299837 - 4302836 | 108894.0 |
| transglycosylase family protein | DQO56_RS19765 | Not Available | - | 4302956 - 4303501 | 18689.7 |
| Trna-met | Not Available | Not Available | + | 4303956 - 4304032 | Not Available |
| acyl-coa synthetase | DQO56_RS19775 | Not Available | - | 4304114 - 4305802 | 60224.2 |
| alpha/beta hydrolase | DQO56_RS19780 | Not Available | + | 4306122 - 4307066 | 33995.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
