Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| comf family protein | DQO56_RS19440 | Not Available | + | 4233118 - 4233762 | 22473.4 |
| ribosome hibernation-promoting factor, hpf/yfia family | DQO56_RS19445 | Not Available | + | 4233972 - 4234637 | 25068.6 |
| preprotein translocase subunit seca | DQO56_RS19450 | Not Available | + | 4234822 - 4237608 | 103598.0 |
| rv3235 family protein | DQO56_RS19455 | Not Available | - | 4237642 - 4238148 | 18099.8 |
| sdr family nad(p)-dependent oxidoreductase | DQO56_RS21740 | Not Available | - | 4238303 - 4238716 | 14252.0 |
| sdr family nad(p)-dependent oxidoreductase | DQO56_RS19465 | Not Available | + | 4238794 - 4239588 | 27871.3 |
| had-ia family hydrolase | DQO56_RS19470 | Not Available | + | 4239652 - 4240092 | 14964.8 |
| ws/dgat/mgat family o-acyltransferase | DQO56_RS19475 | Not Available | + | 4240089 - 4241492 | 51356.3 |
| duf6912 family protein | DQO56_RS19480 | Not Available | + | 4241496 - 4242002 | 18076.1 |
| ferredoxin reductase | DQO56_RS19485 | Not Available | + | 4242192 - 4243322 | 40961.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
