Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQO56_RS19190 | Not Available | + | 4186451 - 4187392 | 34489.5 |
| aldehyde dehydrogenase family protein | DQO56_RS19195 | Not Available | - | 4187425 - 4188927 | 52725.7 |
| lrp/asnc family transcriptional regulator | DQO56_RS19200 | Not Available | + | 4188964 - 4189413 | 16317.5 |
| l-lysine 6-transaminase | DQO56_RS19205 | Not Available | + | 4189480 - 4190856 | 49880.2 |
| tyrosine-protein phosphatase | DQO56_RS19210 | Not Available | + | 4190867 - 4191703 | 29819.1 |
| vanz family protein | DQO56_RS19215 | Not Available | - | 4191739 - 4192098 | 12931.1 |
| duf1707 domain-containing protein | DQO56_RS19220 | Not Available | - | 4192142 - 4192522 | 14232.7 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | DQO56_RS19225 | Not Available | - | 4192853 - 4194643 | 63278.8 |
| condensation domain-containing protein | DQO56_RS19230 | Not Available | - | 4194764 - 4196206 | 53581.3 |
| sufe family protein | DQO56_RS19235 | Not Available | - | 4196228 - 4196641 | 14585.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
