Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQO56_RS01855 | Not Available | + | 399747 - 400454 | 25383.7 |
| paai family thioesterase | DQO56_RS01860 | Not Available | + | 400738 - 401190 | 15950.8 |
| atp-binding cassette domain-containing protein | DQO56_RS01865 | Not Available | + | 401269 - 402204 | 33880.5 |
| abc transporter permease | DQO56_RS01870 | Not Available | + | 402201 - 403877 | 56482.8 |
| duf6223 family protein | DQO56_RS01875 | Not Available | - | 403973 - 404383 | 13430.4 |
| sensor histidine kinase | DQO56_RS01880 | Not Available | + | 404643 - 405911 | 45145.2 |
| response regulator transcription factor | DQO56_RS01885 | Not Available | + | 405908 - 406597 | 24479.4 |
| nad(p)/fad-dependent oxidoreductase | DQO56_RS01890 | Not Available | - | 406640 - 408013 | 49607.6 |
| tyrosine-type recombinase/integrase | DQO56_RS01895 | Not Available | - | 408150 - 409193 | 38306.5 |
| glycosyltransferase 87 family protein | DQO56_RS01900 | Not Available | - | 409387 - 410730 | 49033.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
