Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion protein ecce | DQO56_RS18645 | Not Available | - | 4064318 - 4065937 | 56704.3 |
| type vii secretion protein eccb | DQO56_RS18650 | Not Available | + | 4066043 - 4067494 | 50153.8 |
| type vii secretion-associated serine protease mycosin | DQO56_RS18655 | Not Available | - | 4067499 - 4068866 | 45941.1 |
| type vii secretion integral membrane protein eccd | DQO56_RS18660 | Not Available | - | 4068871 - 4070328 | 48929.2 |
| type vii secretion protein eccca | DQO56_RS18665 | Not Available | + | 4070574 - 4074551 | 141134.0 |
| type vii secretion-associated protein | DQO56_RS18670 | Not Available | + | 4074548 - 4076023 | 51017.0 |
| wxg100 family type vii secretion target | DQO56_RS18675 | Not Available | + | 4076160 - 4076522 | 12422.5 |
| wxg100 family type vii secretion target | DQO56_RS18680 | Not Available | + | 4076569 - 4076874 | 11033.9 |
| 50s ribosomal protein l13 | DQO56_RS18685 | Not Available | + | 4077132 - 4077575 | 16006.4 |
| 30s ribosomal protein s9 | DQO56_RS18690 | Not Available | + | 4077572 - 4078087 | 18921.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
