Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mmcq/yjbr family dna-binding protein | DQO56_RS01510 | Not Available | - | 324320 - 324709 | 14402.2 |
| phosphotransferase family protein | DQO56_RS01515 | Not Available | - | 324806 - 325828 | 37046.3 |
| site-specific integrase | DQO56_RS01520 | Not Available | + | 325945 - 326439 | 17949.5 |
| type iv secretory system conjugative dna transfer family protein | DQO56_RS01525 | Not Available | + | 326452 - 328449 | 72687.2 |
| duf4913 domain-containing protein | DQO56_RS01530 | Not Available | + | 328452 - 328964 | 18965.7 |
| sir2 family protein | DQO56_RS01535 | Not Available | + | 329052 - 330830 | 66281.5 |
| type i restriction endonuclease subunit r | DQO56_RS01540 | Not Available | - | 331090 - 334212 | 115222.0 |
| restriction endonuclease subunit s | DQO56_RS01545 | Not Available | - | 334212 - 335435 | 44681.6 |
| site-specific integrase | DQO56_RS01550 | Not Available | - | 335432 - 336343 | 34120.4 |
| type iii restriction-modification system endonuclease | DQO56_RS01555 | Not Available | - | 336472 - 339552 | 115576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
