Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | DQO56_RS00510 | Not Available | + | 108825 - 109046 | 7979.59 |
| duf2029 domain-containing protein | DQO56_RS00515 | Not Available | + | 109043 - 109546 | 18372.1 |
| malto-oligosyltrehalose synthase | DQO56_RS00520 | Not Available | - | 109624 - 111972 | 84926.3 |
| glycogen debranching protein glgx | DQO56_RS00525 | Not Available | - | 111969 - 114185 | 82324.0 |
| acyltransferase family protein | DQO56_RS00530 | Not Available | - | 114230 - 116308 | 74927.5 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DQO56_RS00535 | Not Available | + | 116511 - 117785 | 44915.0 |
| 8-amino-7-oxononanoate synthase | DQO56_RS00540 | Not Available | + | 117835 - 118974 | 39039.9 |
| dethiobiotin synthase | DQO56_RS00545 | Not Available | + | 118971 - 119648 | 22583.3 |
| duf4185 domain-containing protein | DQO56_RS00550 | Not Available | - | 119787 - 121016 | 44936.8 |
| hypothetical protein | DQO56_RS00555 | Not Available | + | 121747 - 122034 | 10641.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
