Photobacterium damselae subsp. piscicida str. MT1415

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium damselae subsp. piscicida str. MT1415 is a Gram-negative bacterium notable for its potential relevance in aquatic environments. This microorganism is part of the family Vibrionaceae, which includes various species associated with marine ecosystems. The Gram-negative nature of P. damselae subsp. piscicida indicates a distinctive cell wall structure characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. As a member of the genus Photobacterium, this strain may possess the capability for bioluminescence, a trait common among many species in this genus, although specific data on luminescent properties for strain MT1415 is not provided. The ecological significance of P. damselae subsp. piscicida likely encompasses interactions within marine food webs, potentially influencing the dynamics of microbial communities and nutrient cycling in aquatic environments. Further investigation into this strain's metabolic pathways and environmental tolerances could reveal its roles in marine biogeochemistry and its interactions with other microbial organisms. Understanding these traits may also provide insights into the evolutionary adaptations of bacteria within marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium damselae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Photobacterium damselae subsp. piscicida str. MT1415

Accession NumberSUMH00000000.1

Gene Summary

Adenine Count

1115787 bp

Thymine Count

1118841 bp

Guanine Count

771647 bp

Cytosine Count

768966 bp

Genome Length

3775241 bp

Protein-coding Genes

3227 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
f0f1 atp synthase subunit epsilonFA893_03710Not Available+781729 - 78215115144.3
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuFA893_03715Not Available+782342 - 78370048495.1
deor family transcriptional regulatorFA893_03720Not Available+783907 - 78467428070.5
glutamine--fructose-6-phosphate transaminase (isomerizing)FA893_03725Not Available+784692 - 78652466815.2
50s ribosomal protein l20FA893_03730Not Available-786823 - 78717613476.6
50s ribosomal protein l35FA893_03735Not Available-787219 - 7874137296.28
translation initiation factor if-3FA893_03740Not Available-787514 - 78806520599.1
threonine--trna ligaseFA893_03745Not Available-788069 - 79000073706.2
fructosamine kinase family proteinFA893_03750Not Available+790521 - 79138733457.6
hexitol phosphatase hxpbFA893_03755Not Available+791523 - 79217623702.6

Displaying genes 661 – 670 of 3270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites