Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Photobacterium damselae subsp. piscicida str. MT1415
Accession NumberSUMH00000000.1
Gene Summary
Adenine Count
1115787 bp
Thymine Count
1118841 bp
Guanine Count
771647 bp
Cytosine Count
768966 bp
Genome Length
3775241 bp
Protein-coding Genes
3227 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-2-hydroxyacid dehydrogenase | FA893_03560 | Not Available | + | 750140 - 751051 | 34461.1 |
| uroporphyrinogen decarboxylase | FA893_03565 | Not Available | - | 751202 - 752269 | 39613.9 |
| nad(+) diphosphatase | FA893_03570 | Not Available | - | 752440 - 753222 | 29320.4 |
| rsd/algq family anti-sigma factor | FA893_03575 | Not Available | + | 753380 - 753862 | 18521.9 |
| dna-directed rna polymerase subunit beta' | FA893_03580 | Not Available | - | 753996 - 758213 | 155095.0 |
| dna-directed rna polymerase subunit beta | FA893_03585 | Not Available | - | 758313 - 762338 | 149380.0 |
| 50s ribosomal protein l7/l12 | FA893_03590 | Not Available | - | 762564 - 762929 | 12221.7 |
| 50s ribosomal protein l10 | FA893_03595 | Not Available | - | 762989 - 763483 | 17516.1 |
| 50s ribosomal protein l1 | FA893_03600 | Not Available | - | 763707 - 764411 | 24883.1 |
| 50s ribosomal protein l11 | FA893_03605 | Not Available | - | 764416 - 764844 | 14777.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.