Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Photobacterium damselae subsp. piscicida str. MT1415
Accession NumberSUMH00000000.1
Gene Summary
Adenine Count
1115787 bp
Thymine Count
1118841 bp
Guanine Count
771647 bp
Cytosine Count
768966 bp
Genome Length
3775241 bp
Protein-coding Genes
3227 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | FA893_03000 | Not Available | + | 636194 - 636925 | 26941.7 |
| fe-s cluster assembly transcriptional regulator iscr | FA893_03005 | Not Available | + | 637036 - 637557 | 18639.3 |
| iscs subfamily cysteine desulfurase | FA893_03010 | Not Available | + | 637589 - 638803 | 44883.6 |
| fe-s cluster assembly scaffold iscu | FA893_03015 | Not Available | + | 638841 - 639227 | 13690.2 |
| iron-sulfur cluster assembly protein isca | FA893_03020 | Not Available | + | 639245 - 639568 | 11528.7 |
| co-chaperone hscb | FA893_03025 | Not Available | + | 639644 - 640159 | 20233.0 |
| fe-s protein assembly chaperone hsca | FA893_03030 | Not Available | + | 640294 - 642147 | 65965.9 |
| isc system 2fe-2s type ferredoxin | FA893_03035 | Not Available | + | 642150 - 642488 | 12321.5 |
| fe-s cluster assembly protein iscx | FA893_03040 | Not Available | + | 642551 - 642745 | 7612.94 |
| aminopeptidase pepb | FA893_03045 | Not Available | + | 643033 - 644319 | 45788.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.