Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Photobacterium damselae subsp. piscicida str. MT1415
Accession NumberSUMH00000000.1
Gene Summary
Adenine Count
1115787 bp
Thymine Count
1118841 bp
Guanine Count
771647 bp
Cytosine Count
768966 bp
Genome Length
3775241 bp
Protein-coding Genes
3227 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | FA893_02895 | Not Available | - | 614758 - 615795 | 38109.0 |
| iron abc transporter permease | FA893_02900 | Not Available | - | 615798 - 617423 | 60601.4 |
| fe(3+) abc transporter substrate-binding protein | FA893_02905 | Not Available | - | 617580 - 618593 | 37740.1 |
| ammonium transporter | FA893_02910 | Not Available | - | 618784 - 620013 | 43037.5 |
| p-ii family nitrogen regulator | FA893_02915 | Not Available | - | 620077 - 620415 | 12348.0 |
| upf0231 family protein | FA893_02920 | Not Available | - | 620598 - 620966 | 14278.5 |
| xre family transcriptional regulator | FA893_02925 | Not Available | + | 621022 - 622179 | 43741.1 |
| gntp family permease | FA893_02930 | Not Available | + | 622311 - 623576 | 42418.7 |
| glycerate kinase | FA893_02935 | Not Available | + | 623587 - 624720 | 38966.0 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | FA893_02940 | Not Available | - | 624846 - 627443 | 93627.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.