Photobacterium damselae subsp. piscicida str. MT1415

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium damselae subsp. piscicida str. MT1415 is a Gram-negative bacterium notable for its potential relevance in aquatic environments. This microorganism is part of the family Vibrionaceae, which includes various species associated with marine ecosystems. The Gram-negative nature of P. damselae subsp. piscicida indicates a distinctive cell wall structure characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. As a member of the genus Photobacterium, this strain may possess the capability for bioluminescence, a trait common among many species in this genus, although specific data on luminescent properties for strain MT1415 is not provided. The ecological significance of P. damselae subsp. piscicida likely encompasses interactions within marine food webs, potentially influencing the dynamics of microbial communities and nutrient cycling in aquatic environments. Further investigation into this strain's metabolic pathways and environmental tolerances could reveal its roles in marine biogeochemistry and its interactions with other microbial organisms. Understanding these traits may also provide insights into the evolutionary adaptations of bacteria within marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium damselae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Photobacterium damselae subsp. piscicida str. MT1415

Accession NumberSUMH00000000.1

Gene Summary

Adenine Count

1115787 bp

Thymine Count

1118841 bp

Guanine Count

771647 bp

Cytosine Count

768966 bp

Genome Length

3775241 bp

Protein-coding Genes

3227 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
atp-dependent rna helicase hrpaFA893_17335Not Available-3582392 - 3586306150448.0
zinc transporter zntbFA893_17340Not Available+3586646 - 358761136634.9
restriction endonuclease subunit sFA893_17355Not Available-3589712 - 359143664496.9
response regulatorFA893_17365Not Available+3592651 - 359376641369.6
peptide deformylaseFA893_17370Not Available+3593949 - 359446419345.5
two pore domain potassium channel family proteinFA893_17375Not Available-3594520 - 359554538927.3
ld-carboxypeptidaseFA893_17380Not Available-3595687 - 359663135233.3
anhydro-n-acetylmuramic acid kinaseFA893_17385Not Available-3596735 - 359785940741.2
lysr family transcriptional regulatorFA893_17390Not Available-3597890 - 359880133607.2
glycine c-acetyltransferaseFA893_17395Not Available+3599033 - 360022643071.4

Displaying genes 3101 – 3110 of 3270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites