Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae
Accession NumberPYOG00000000.1
Gene Summary
Adenine Count
1471526 bp
Thymine Count
1452799 bp
Guanine Count
987751 bp
Cytosine Count
1002840 bp
Genome Length
4914916 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CTN07_03295 | Not Available | - | 707914 - 708912 | 37393.4 |
| peptide abc transporter permease sapc | CTN07_03300 | Not Available | - | 708912 - 709799 | 32209.0 |
| antimicrobial peptide abc transporter permease sapb | CTN07_03305 | Not Available | - | 709786 - 710748 | 35815.2 |
| peptide abc transporter substrate-binding protein sapa | CTN07_03310 | Not Available | - | 710752 - 712371 | 60421.7 |
| phage shock protein operon transcriptional activator | CTN07_03315 | Not Available | - | 712517 - 713524 | 38081.4 |
| phage shock protein pspa | CTN07_03320 | Not Available | + | 713758 - 714423 | 25376.1 |
| envelope stress response membrane protein pspb | CTN07_03325 | Not Available | + | 714490 - 714717 | 8752.9 |
| envelope stress response membrane protein pspc | CTN07_03330 | Not Available | + | 714717 - 715103 | 14643.9 |
| ycjx family protein | CTN07_03335 | Not Available | + | 715353 - 716747 | 53325.1 |
| tigr01620 family protein | CTN07_03340 | Not Available | + | 716747 - 717775 | 38088.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.