Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae
Accession NumberPYOG00000000.1
Gene Summary
Adenine Count
1471526 bp
Thymine Count
1452799 bp
Guanine Count
987751 bp
Cytosine Count
1002840 bp
Genome Length
4914916 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | CTN07_02640 | Not Available | - | 566387 - 567118 | 26899.7 |
| inositol-1-monophosphatase | CTN07_02645 | Not Available | + | 567388 - 568191 | 28900.6 |
| protein translocase subunit secf | CTN07_02650 | Not Available | - | 568905 - 569852 | 34195.1 |
| protein translocase subunit secd | CTN07_02655 | Not Available | - | 569866 - 571719 | 67193.8 |
| preprotein translocase subunit yajc | CTN07_02660 | Not Available | - | 571763 - 572101 | 12170.1 |
| trna guanosine(34) transglycosylase tgt | CTN07_02665 | Not Available | - | 572125 - 573258 | 42933.5 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | CTN07_02670 | Not Available | - | 573639 - 574691 | 38934.2 |
| glygly-cterm sorting domain-containing protein | CTN07_02675 | Not Available | - | 574786 - 575904 | 40863.6 |
| cbs domain-containing protein | CTN07_02680 | Not Available | + | 576078 - 576554 | 17267.7 |
| isocitrate lyase | CTN07_02685 | Not Available | - | 576638 - 577945 | 47940.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.