Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae
Accession NumberPYOG00000000.1
Gene Summary
Adenine Count
1471526 bp
Thymine Count
1452799 bp
Guanine Count
987751 bp
Cytosine Count
1002840 bp
Genome Length
4914916 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | CTN07_02540 | Not Available | - | 547828 - 549327 | 56033.2 |
| outer membrane protein assembly factor bamb | CTN07_02545 | Not Available | - | 549541 - 550704 | 41238.7 |
| hypothetical protein | CTN07_02550 | Not Available | - | 550716 - 551330 | 22332.3 |
| histidine--trna ligase | CTN07_02555 | Not Available | - | 551344 - 552612 | 47379.0 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | CTN07_02560 | Not Available | - | 552709 - 553830 | 41007.4 |
| cytoskeleton protein rodz | CTN07_02565 | Not Available | - | 553844 - 554827 | 35693.6 |
| type iv pilus biogenesis/stability protein pilw | CTN07_02570 | Not Available | - | 554820 - 555575 | 28753.2 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | CTN07_02575 | Not Available | - | 555629 - 556747 | 41954.8 |
| hypothetical protein | CTN07_02580 | Not Available | + | 556801 - 557055 | 10024.5 |
| nucleoside-diphosphate kinase | CTN07_02585 | Not Available | - | 557130 - 557555 | 15730.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.