Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae
Accession NumberPYOG00000000.1
Gene Summary
Adenine Count
1471526 bp
Thymine Count
1452799 bp
Guanine Count
987751 bp
Cytosine Count
1002840 bp
Genome Length
4914916 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-length control protein flik | CTN07_01885 | Not Available | - | 416641 - 418443 | 64519.7 |
| flagella biosynthesis chaperone flij | CTN07_01890 | Not Available | - | 418632 - 419084 | 17995.4 |
| flagellar protein export atpase flii | CTN07_01895 | Not Available | - | 419179 - 420492 | 46538.6 |
| flagellar assembly protein flih | CTN07_01900 | Not Available | - | 420489 - 421304 | 30496.3 |
| flagellar motor switch protein flig | CTN07_01905 | Not Available | - | 421316 - 422356 | 38355.9 |
| flagellar basal body m-ring protein flif | CTN07_01910 | Not Available | - | 422346 - 424091 | 63795.4 |
| flagellar hook-basal body complex protein flie | CTN07_01915 | Not Available | - | 424130 - 424441 | 11193.4 |
| sigma-54-dependent fis family transcriptional regulator | CTN07_01920 | Not Available | - | 424549 - 426009 | 54068.4 |
| pas domain-containing sensor histidine kinase | CTN07_01925 | Not Available | - | 426013 - 427026 | 36841.1 |
| sigma-54-dependent fis family transcriptional regulator | CTN07_01930 | Not Available | - | 427350 - 428795 | 54194.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.