Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae
Accession NumberPYOG00000000.1
Gene Summary
Adenine Count
1471526 bp
Thymine Count
1452799 bp
Guanine Count
987751 bp
Cytosine Count
1002840 bp
Genome Length
4914916 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptg | CTN07_21085 | Not Available | - | 4635714 - 4636784 | 39648.1 |
| lps export abc transporter permease lptf | CTN07_21090 | Not Available | - | 4636784 - 4637884 | 40678.4 |
| leucyl aminopeptidase | CTN07_21095 | Not Available | + | 4638079 - 4639587 | 54454.7 |
| dna polymerase iii subunit chi | CTN07_21100 | Not Available | + | 4639692 - 4640144 | 17166.3 |
| valine--trna ligase | CTN07_21105 | Not Available | + | 4640173 - 4643034 | 108043.0 |
| duf2061 domain-containing protein | CTN07_21110 | Not Available | + | 4643236 - 4643637 | 14914.4 |
| type ix secretion system membrane protein porp/sprf | CTN07_21115 | Not Available | - | 4643855 - 4645054 | 43378.6 |
| glycoside hydrolase family 2 protein | CTN07_21120 | Not Available | - | 4645267 - 4647693 | 93477.8 |
| ribonuclease e inhibitor rrab | CTN07_21125 | Not Available | - | 4647995 - 4648396 | 15110.0 |
| yfcc family protein | CTN07_21130 | Not Available | + | 4649118 - 4650575 | 52044.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.