Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae
Accession NumberPYOG00000000.1
Gene Summary
Adenine Count
1471526 bp
Thymine Count
1452799 bp
Guanine Count
987751 bp
Cytosine Count
1002840 bp
Genome Length
4914916 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | CTN07_19445 | Not Available | - | 4299991 - 4301061 | 40174.1 |
| sugar transporter | CTN07_19450 | Not Available | - | 4301065 - 4302504 | 54893.0 |
| hypothetical protein | CTN07_19455 | Not Available | - | 4302504 - 4302854 | 13335.4 |
| glycosyltransferase family 1 protein | CTN07_19460 | Not Available | - | 4302950 - 4304056 | 42413.3 |
| oligosaccharide repeat unit polymerase | CTN07_19465 | Not Available | - | 4304057 - 4305379 | 48989.0 |
| polysaccharide biosynthesis family protein | CTN07_19470 | Not Available | - | 4305376 - 4306725 | 49801.2 |
| colanic acid biosynthesis glycosyltransferase wcal | CTN07_19475 | Not Available | - | 4306722 - 4307858 | 42299.3 |
| atp-dependent chaperone clpb | CTN07_19485 | Not Available | - | 4308985 - 4311558 | 95660.9 |
| peptidoglycan editing factor pgef | CTN07_19490 | Not Available | - | 4311726 - 4312460 | 26679.7 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | CTN07_19495 | Not Available | - | 4312460 - 4313434 | 36698.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.