Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae
Accession NumberPYOG00000000.1
Gene Summary
Adenine Count
1471526 bp
Thymine Count
1452799 bp
Guanine Count
987751 bp
Cytosine Count
1002840 bp
Genome Length
4914916 bp
Protein-coding Genes
4201 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase dbpa | CTN07_04720 | Not Available | - | 1045627 - 1047018 | 50656.3 |
| alkaline phosphatase | CTN07_04725 | Not Available | - | 1047109 - 1048686 | 57339.0 |
| duf229 domain-containing protein | CTN07_04730 | Not Available | - | 1048893 - 1050512 | 60537.1 |
| carboxymuconolactone decarboxylase | CTN07_04735 | Not Available | - | 1050709 - 1051257 | 20581.9 |
| tetr/acrr family transcriptional regulator | CTN07_04740 | Not Available | + | 1051491 - 1052078 | 21803.1 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | CTN07_04745 | Not Available | + | 1052371 - 1053207 | 29406.3 |
| abc transporter atp-binding protein | CTN07_04750 | Not Available | + | 1053217 - 1053984 | 28665.8 |
| abc transporter permease | CTN07_04755 | Not Available | + | 1053977 - 1054780 | 29588.8 |
| abc transporter atp-binding protein | CTN07_04760 | Not Available | + | 1054815 - 1055762 | 34729.7 |
| thiaminase ii | CTN07_04765 | Not Available | + | 1055817 - 1056476 | 24883.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.