Rhodococcus opacus str. R7

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus opacus strain R7 is a Gram-positive bacterium characterized by its cocci shape and filamentous cell arrangement. This microbe requires oxygen for growth, classifying it as an aerobic organism. The structural properties of R. opacus str. R7, particularly its filamentous arrangement, may confer advantages in nutrient acquisition and colonization in various environments. R. opacus species are known for their metabolic versatility, including the ability to degrade a range of organic compounds, which suggests potential applications in bioremediation processes. While the specific biochemical pathways utilized by strain R7 are not detailed here, the broader genus is recognized for its capacity to metabolize hydrocarbons and other complex organic molecules. This trait may enable R. opacus str. R7 to thrive in environments impacted by anthropogenic activities, such as contaminated soils or waste sites. In conclusion, the filamentous arrangement of R. opacus str. R7, coupled with its aerobic metabolism, positions it as a potentially important organism in ecological contexts where organic degradation and nutrient cycling are critical. Further research could elucidate its specific roles in such environments, enhancing our understanding of microbial contributions to ecosystem health and recovery.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus opacus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Rhodococcus opacus str. R7
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus opacus str. R7

Accession NumberNZ_CP008950.1

Gene Summary

Adenine Count

59785 bp

Thymine Count

59429 bp

Guanine Count

117271 bp

Cytosine Count

115602 bp

Genome Length

352342 bp

Protein-coding Genes

343 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
amino acid abc transporter atp-binding proteinEP51_RS39370Not Available+160086 - 16084126788.6
nad(p)-dependent oxidoreductaseEP51_RS39375Not Available+160881 - 16180432681.7
aph(3') family aminoglycoside o-phosphotransferaseEP51_RS39380Not Available+162197 - 16298529182.4
chat domain-containing proteinEP51_RS39390Not Available-163651 - 16449931362.8
hypothetical proteinEP51_RS46895Not Available-164512 - 1647458290.84
nucleotidyl transferase abieii/abigii toxin family proteinEP51_RS39395Not Available-165233 - 16615633827.3
type iv toxin-antitoxin system abiei family antitoxin domain-containing proteinEP51_RS39400Not Available-166153 - 16710633176.3
duf4193 domain-containing proteinEP51_RS39405Not Available+167541 - 16783410655.1
Trna-metNot AvailableNot Available+167956 - 168032Not Available
hypothetical proteinEP51_RS39415Not Available-168123 - 16847012476.9

Displaying genes 491 – 500 of 1111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites