Nocardia farcinica str. TRH1

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia farcinica strain TRH1 is a Gram-positive, coccoid bacterium characterized by its filamentous cell arrangement. This microbe is a chemoheterotroph, deriving its energy from organic compounds, and thrives optimally at a temperature of 37.0°C. As an aerobic organism, N. farcinica TRH1 requires oxygen for its metabolic processes, which aligns with its habitat preference for soil environments. The nonsporulating nature of this strain suggests a reliance on vegetative growth under favorable conditions rather than forming spores as a survival strategy. The filamentous arrangement of its cells may contribute to its ability to colonize and interact with soil microenvironments effectively, potentially facilitating its role in nutrient cycling within its ecosystem. Overall, the ecological insight into Nocardia farcinica str. TRH1 highlights its adaptation to soil habitats where it may play a significant role in the decomposition of organic materials, thus influencing soil health and fertility in its native environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia farcinica
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Nocardia farcinica str. TRH1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Nocardia farcinica str. TRH1

Accession NumberLYCQ00000000.1

Gene Summary

Adenine Count

836799 bp

Thymine Count

839374 bp

Guanine Count

1772625 bp

Cytosine Count

1781215 bp

Genome Length

5230013 bp

Protein-coding Genes

4323 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type vii secretion integral membrane protein eccdA8M60_15750Not Available-762243 - 76379653263.7
type vii secretion protein ecccA8M60_15755Not Available+763894 - 767973147140.0
type vii secretion-associated proteinA8M60_15760Not Available+767990 - 76933647165.7
50s ribosomal protein l13A8M60_15765Not Available+769514 - 76995716070.6
30s ribosomal protein s9A8M60_15770Not Available+769954 - 77047518969.7
phosphoglucosamine mutaseA8M60_15775Not Available+770478 - 77182446015.8
haloacid dehalogenaseA8M60_15780Not Available+771821 - 77252524949.6
hypothetical proteinA8M60_15785Not Available+772691 - 77307112941.1
hypothetical proteinA8M60_15790Not Available+773068 - 77419538208.3
hypothetical proteinA8M60_15795Not Available+774192 - 7744529274.72

Displaying genes 631 – 640 of 4374 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites