Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Bifidobacterium choerinum str. LMG 10510
Accession NumberJGYU00000000.1
Gene Summary
Adenine Count
354308 bp
Thymine Count
368198 bp
Guanine Count
688942 bp
Cytosine Count
684666 bp
Genome Length
2096123 bp
Protein-coding Genes
1657 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xylr-type repressor | BCHO_0560 | Not Available | - | 200997 - 202220 | 43541.5 |
| xylulose kinase | BCHO_0561 | Not Available | + | 202421 - 203956 | 52694.9 |
| beta-xylosidase | BCHO_0562 | Not Available | - | 204181 - 205806 | 61567.0 |
| thiamine abc transporter atp-binding protein | BCHO_0563 | Not Available | - | 205886 - 206800 | 33593.1 |
| sugar abc transporter permease | BCHO_0564 | Not Available | - | 206797 - 207861 | 39716.2 |
| sugar abc transporter substrate-binding protein | BCHO_0565 | Not Available | - | 207936 - 209219 | 45532.4 |
| laci family transcriptional regulator | BCHO_0566 | Not Available | + | 209501 - 210505 | 36623.6 |
| alpha-l-arabinofuranosidase | BCHO_0567 | Not Available | - | 210516 - 212201 | 61373.7 |
| beta-xylosidase | BCHO_0568 | Not Available | - | 212194 - 213852 | 60731.7 |
| xylose isomerase | BCHO_0569 | Not Available | - | 214177 - 215526 | 50408.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
