Riemerella anatipestifer str. RCAD0133

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Riemerella

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusRiemerella
SpeciesRiemerella anatipestifer
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Riemerella anatipestifer str. RCAD0133

Accession NumberNZ_CP029760.1

Gene Summary

Adenine Count

810773 bp

Thymine Count

824028 bp

Guanine Count

433820 bp

Cytosine Count

440519 bp

Genome Length

2509140 bp

Protein-coding Genes

2377 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rtec domain-containing proteinAWB57_RS05005Not Available+992190 - 99302333655.2
helix-turn-helix domain-containing proteinAWB57_RS05010Not Available+993293 - 99364014066.0
toprim domain-containing proteinAWB57_RS05015Not Available+993612 - 99567578003.4
helix-turn-helix domain-containing proteinAWB57_RS05020Not Available+995696 - 99601312608.4
hypothetical proteinAWB57_RS05025Not Available+996118 - 9963759650.08
is982-like element isra1 family transposaseAWB57_RS05030Not Available-996355 - 99723334543.0
duf3945 domain-containing proteinAWB57_RS05035Not Available+997345 - 99862248811.9
type ia dna topoisomeraseAWB57_RS05040P96583+998670 - 100077279402.8
type iv toxin-antitoxin system abiei family antitoxin domain-containing proteinAWB57_RS05045Not Available+1001004 - 100178329845.6
nucleotidyl transferase abieii/abigii toxin family proteinAWB57_RS05050Not Available+1001780 - 100270636023.2

Displaying genes 1031 – 1040 of 2469 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

119 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da

Displaying 1–10 of 119 metabolites