Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | APR51_04230 | Not Available | - | 897293 - 897979 | 24218.8 |
| hypothetical protein | APR51_04235 | Not Available | - | 897986 - 898963 | 34278.8 |
| lysr family transcriptional regulator | APR51_04240 | Not Available | + | 899101 - 900024 | 33297.0 |
| hypothetical protein | APR51_04245 | Not Available | + | 900127 - 900576 | 16339.0 |
| phosphoesterase pa-phosphatase | APR51_04250 | Not Available | + | 900771 - 901334 | 19470.3 |
| glycosyl transferase family 2 | APR51_04255 | Q55487 | + | 901373 - 902344 | 35721.4 |
| glycosyl transferase family 39 | APR51_04260 | Q4KC80 | + | 902341 - 903906 | 57159.3 |
| hypothetical protein | APR51_04265 | Not Available | + | 903903 - 904754 | 30197.8 |
| rna polymerase subunit sigma | APR51_04270 | Not Available | + | 904858 - 905367 | 18748.6 |
| hypothetical protein | APR51_04275 | Not Available | + | 905357 - 906367 | 35712.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.