Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR51_03520 | P42427 | - | 748604 - 749491 | 32740.4 |
| phosphonate abc transporter substrate-binding protein | APR51_03525 | O69052 | + | 749775 - 750518 | 26588.9 |
| phosphonate abc transporter atp-binding protein | APR51_03530 | Q3SGJ8 | + | 750515 - 751321 | 28858.9 |
| phosphate abc transporter permease | APR51_03535 | O69053 | + | 751357 - 752142 | 28271.2 |
| alcohol dehydrogenase | APR51_03540 | D9XF45 | + | 752216 - 753313 | 38809.6 |
| thiamine biosynthesis protein thij | APR51_03545 | Not Available | - | 753314 - 754459 | 40304.4 |
| transcriptional regulator | APR51_03550 | A0A0H2ZIC3 | + | 754500 - 755516 | 36138.2 |
| hypothetical protein | APR51_03555 | F2R776 | + | 755567 - 757018 | 52521.7 |
| hypothetical protein | APR51_03560 | Not Available | - | 757031 - 757375 | 11320.6 |
| isocitrate dehydrogenase | APR51_03565 | P16100 | - | 757402 - 759639 | 82516.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.