Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | APR51_03315 | Not Available | - | 701388 - 702101 | 24883.7 |
| hypothetical protein | APR51_03320 | Not Available | - | 702098 - 703204 | 39117.1 |
| transketolase | APR51_03325 | Not Available | - | 703222 - 704211 | 35115.2 |
| transketolase | APR51_03330 | Not Available | - | 704204 - 705052 | 30488.1 |
| abc transporter atp-binding protein | APR51_03335 | Not Available | - | 705079 - 705795 | 25526.5 |
| abc transporter atp-binding protein | APR51_03340 | Not Available | - | 705776 - 706522 | 26542.5 |
| abc transporter permease | APR51_03345 | Not Available | - | 706519 - 707538 | 36503.7 |
| abc transporter permease | APR51_03350 | Not Available | - | 707559 - 708452 | 30811.1 |
| abc transporter substrate-binding protein | APR51_03355 | Not Available | - | 708545 - 709819 | 45676.4 |
| hypothetical protein | APR51_03360 | Not Available | + | 709964 - 710398 | 15519.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.