Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR51_03055 | Not Available | + | 648715 - 649233 | 18919.4 |
| l-dehydroascorbate transporter large permease subunit | APR51_03060 | Not Available | + | 649256 - 650533 | 44843.5 |
| abc transporter substrate-binding protein | APR51_03065 | P44992 | + | 650573 - 651556 | 35690.0 |
| dimethylmenaquinone methyltransferase | APR51_03070 | Q9AQI0 | + | 651671 - 652321 | 22906.6 |
| 2-dehydro-3-deoxygluconokinase | APR51_03075 | Q53W83 | + | 652308 - 653252 | 32625.8 |
| methionine gamma-lyase | APR51_03080 | P13254 | - | 653259 - 654458 | 43004.0 |
| methionine gamma-lyase | APR51_03085 | Not Available | - | 654589 - 655791 | 42986.2 |
| hypothetical protein | APR51_03090 | P45769 | - | 655827 - 656567 | 28164.5 |
| amino acid abc transporter permease | APR51_03095 | P45768 | - | 656601 - 657707 | 40226.5 |
| amino acid abc transporter permease | APR51_03100 | Not Available | - | 657709 - 658899 | 42145.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.