Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | APR51_01920 | Not Available | + | 393289 - 393876 | 22209.7 |
| lysr family transcriptional regulator | APR51_01925 | Not Available | - | 393904 - 394818 | 34293.4 |
| twin-arginine translocation pathway signal protein | APR51_01930 | Not Available | + | 395038 - 396039 | 35503.8 |
| abc transporter permease | APR51_01935 | Not Available | + | 396216 - 396911 | 25713.2 |
| abc transporter | APR51_01940 | Q7W9U5 | + | 396913 - 397719 | 29283.0 |
| enoyl-coa hydratase | APR51_01945 | Not Available | + | 397740 - 398534 | 28987.9 |
| thiolase | APR51_01950 | Not Available | + | 398538 - 399704 | 41782.9 |
| dna-binding protein | APR51_01955 | Not Available | + | 399710 - 400138 | 15482.8 |
| amp-dependent synthetase | APR51_01960 | Not Available | + | 400146 - 401696 | 55943.6 |
| hypothetical protein | APR51_01965 | I6Y3V5 | + | 401988 - 402971 | 35380.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.