Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transferase | APR51_01610 | O29329 | + | 329649 - 330584 | 34502.3 |
| short-chain dehydrogenase | APR51_01615 | Q5TJF5 | + | 330581 - 331333 | 25258.3 |
| acetylpolyamine aminohydrolase | APR51_01620 | Not Available | + | 331366 - 332403 | 37265.1 |
| spermidine/putrescine abc transporter substrate-binding protein | APR51_01625 | Q9I6R6 | + | 332449 - 333492 | 38149.9 |
| acetylpolyamine aminohydrolase | APR51_01630 | Q3JUN4 | + | 333525 - 334547 | 36629.2 |
| hypothetical protein | APR51_01635 | Not Available | - | 334561 - 335256 | 25976.2 |
| hypothetical protein | APR51_01640 | Not Available | - | 335266 - 336354 | 39424.9 |
| aminotransferase | APR51_01645 | Q7XN11 | - | 336351 - 337781 | 51271.4 |
| hypothetical protein | APR51_01650 | Not Available | - | 338095 - 338451 | 13529.0 |
| hypothetical protein | APR51_01655 | Not Available | + | 339104 - 339313 | 7455.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.