Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR51_01560 | Not Available | + | 321802 - 322428 | 23300.0 |
| hypothetical protein | APR51_01565 | Not Available | + | 322616 - 322948 | 12138.3 |
| amino acid transporter | APR51_01570 | Not Available | + | 322954 - 323199 | 8899.78 |
| prevent-host-death protein | APR51_01575 | Not Available | + | 323290 - 323637 | 12866.2 |
| hypothetical protein | APR51_01580 | Not Available | + | 323637 - 324308 | 23826.4 |
| transketolase | APR51_01585 | A6KXB3 | - | 324310 - 325320 | 35463.8 |
| transketolase | APR51_01590 | Q58094 | - | 325337 - 326203 | 32102.4 |
| spermidine/putrescine abc transporter substrate-binding protein | APR51_01595 | Not Available | + | 326437 - 327507 | 39356.9 |
| hypothetical protein | APR51_01600 | Not Available | + | 327561 - 328802 | 44404.2 |
| polyamine abc transporter permease | APR51_01605 | Not Available | + | 328822 - 329652 | 29521.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.