Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system, toxin component, pin family protein | APR51_01305 | L0TGF0 | + | 269849 - 270424 | 21544.9 |
| short-chain dehydrogenase | APR51_01310 | Not Available | - | 270518 - 271291 | 25961.9 |
| 3-ketoacyl-acp reductase | APR51_01315 | Not Available | - | 271288 - 272082 | 27075.4 |
| aminotransferase | APR51_01320 | C0ZUX9 | - | 272079 - 273470 | 50368.2 |
| had family hydrolase | APR51_01325 | Not Available | - | 273467 - 274141 | 24727.5 |
| hypothetical protein | APR51_01330 | Q8YDP7 | - | 274147 - 275391 | 42832.8 |
| hypothetical protein | APR51_01335 | Q9I6J2 | - | 275388 - 276758 | 49586.5 |
| aldehyde dehydrogenase | APR51_01340 | Q1JUP4 | - | 276755 - 278197 | 51559.9 |
| hypothetical protein | APR51_01345 | Not Available | + | 278323 - 278820 | 18315.0 |
| atpase | APR51_01350 | Not Available | - | 278826 - 279305 | 18029.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.