Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endolysin | DI587_39280 | Not Available | + | 8302043 - 8302639 | 21629.8 |
| hypothetical protein | DI587_39285 | Not Available | + | 8302636 - 8302935 | 10940.8 |
| hypothetical protein | DI587_39290 | Not Available | + | 8302935 - 8303324 | 13734.4 |
| hypothetical protein | DI587_39295 | Not Available | + | 8303436 - 8303642 | 7699.14 |
| four-helix bundle copper-binding protein | DI587_39300 | Not Available | - | 8303649 - 8303978 | 11374.7 |
| rnd transporter | DI587_39305 | Not Available | - | 8304064 - 8304408 | 12000.5 |
| dna polymerase iv | DI587_39310 | Not Available | - | 8304405 - 8305481 | 39816.1 |
| integrase | DI587_39315 | Not Available | - | 8305830 - 8306612 | 28981.3 |
| integrase | DI587_39320 | Not Available | - | 8306609 - 8307541 | 35057.1 |
| integrase | DI587_39325 | Not Available | - | 8307538 - 8307929 | 13800.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.