Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 4 | DI587_39055 | Not Available | - | 8272870 - 8273062 | 7170.83 |
| Trna-ala | Not Available | Not Available | + | 8275059 - 8275132 | Not Available |
| Trna-ile | Not Available | Not Available | + | 8275215 - 8275291 | Not Available |
| tigr03747 family integrating conjugative element membrane protein | DI587_39080 | Not Available | + | 8277353 - 8277470 | 3928.09 |
| imma/irre family metallo-endopeptidase | DI587_39085 | Not Available | - | 8277528 - 8278397 | 32306.7 |
| xre family transcriptional regulator | DI587_39090 | Not Available | - | 8278400 - 8278792 | 14369.0 |
| duf2188 domain-containing protein | DI587_39095 | Not Available | + | 8279081 - 8279305 | 8074.31 |
| is110 family transposase | DI587_39105 | Not Available | - | 8280482 - 8281528 | 38627.0 |
| hypothetical protein | DI587_39110 | Not Available | + | 8281633 - 8282448 | 30851.7 |
| hypothetical protein | DI587_39115 | Not Available | + | 8282747 - 8283013 | 10162.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.