Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase | DI587_38865 | Not Available | - | 8240915 - 8241721 | 29445.0 |
| mfs transporter | DI587_38870 | Not Available | - | 8241814 - 8243145 | 48509.0 |
| rotamase | DI587_38875 | Not Available | - | 8243169 - 8244059 | 33335.2 |
| respiratory nitrate reductase subunit gamma | DI587_38880 | Not Available | - | 8244063 - 8244740 | 25150.2 |
| alpha/beta hydrolase | DI587_38885 | Not Available | + | 8244769 - 8245665 | 31078.0 |
| thymidine kinase | DI587_38890 | Not Available | + | 8245675 - 8246253 | 21049.2 |
| gnat family n-acetyltransferase | DI587_38895 | Not Available | + | 8246259 - 8246801 | 19894.9 |
| had family hydrolase | DI587_38900 | Not Available | - | 8246875 - 8247570 | 25095.1 |
| trna pseudouridine(55) synthase trub | DI587_38905 | Not Available | + | 8247735 - 8248464 | 25736.9 |
| cation transporter | DI587_38910 | Not Available | - | 8248465 - 8248578 | 3976.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.