Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DI587_38640 | Not Available | - | 8199650 - 8200552 | 31646.0 |
| p-type conjugative transfer protein trbl | DI587_38650 | Not Available | - | 8201015 - 8201833 | 29059.2 |
| hypothetical protein | DI587_38655 | Not Available | - | 8201830 - 8202132 | 10665.8 |
| p-type conjugative transfer protein trbj | DI587_38660 | Not Available | - | 8202145 - 8202888 | 27282.5 |
| duf853 domain-containing protein | DI587_38665 | Not Available | - | 8202885 - 8205332 | 89470.7 |
| conjugal transfer protein trbd | DI587_38670 | Not Available | - | 8205345 - 8205614 | 9469.74 |
| conjugal transfer protein trbc | DI587_38675 | Not Available | - | 8205611 - 8205997 | 13421.7 |
| p-type conjugative transfer atpase trbb | DI587_38680 | Not Available | - | 8205994 - 8206332 | 11572.2 |
| putative baseplate assembly protein | DI587_38685 | Not Available | - | 8206920 - 8209187 | 80692.4 |
| baseplate assembly protein | DI587_38690 | Not Available | - | 8209192 - 8209584 | 14336.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.