Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DI587_38535 | Not Available | + | 8179545 - 8180519 | 32783.1 |
| laci family transcriptional regulator | DI587_38540 | Not Available | + | 8180525 - 8181535 | 36057.7 |
| ribokinase | DI587_38545 | Not Available | + | 8181532 - 8182473 | 31806.5 |
| d-ribose pyranase | DI587_38550 | Not Available | + | 8182470 - 8182862 | 13663.9 |
| nucleoside hydrolase | DI587_38555 | Not Available | - | 8182894 - 8184015 | 40250.9 |
| laci family transcriptional regulator | DI587_38560 | Not Available | - | 8184027 - 8184135 | 3690.5 |
| hypothetical protein | DI587_38565 | Not Available | + | 8184415 - 8184603 | 6957.29 |
| sam-dependent methyltransferase | DI587_38570 | Not Available | + | 8184788 - 8187514 | 101815.0 |
| hypothetical protein | DI587_38575 | Not Available | + | 8187515 - 8188231 | 27251.2 |
| hypothetical protein | DI587_38580 | Not Available | + | 8188310 - 8188819 | 19093.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.