Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rieske (2fe-2s) protein | DI587_38285 | Not Available | + | 8137237 - 8138415 | 44525.0 |
| dehydrogenase | DI587_38290 | Not Available | + | 8138412 - 8139170 | 26558.9 |
| abc transporter substrate-binding protein | DI587_38295 | Not Available | + | 8139248 - 8140264 | 35497.0 |
| short-chain dehydrogenase | DI587_38300 | Not Available | + | 8140361 - 8141155 | 28096.6 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DI587_38305 | Not Available | + | 8141169 - 8141960 | 28666.3 |
| is3 family transposase | DI587_38310 | Not Available | - | 8141998 - 8143308 | 48410.3 |
| hypothetical protein | DI587_38315 | Not Available | - | 8143787 - 8144005 | 7839.66 |
| hypothetical protein | DI587_38320 | Not Available | - | 8144010 - 8144306 | 10419.3 |
| hypothetical protein | DI587_38325 | Not Available | - | 8144447 - 8144830 | 14283.2 |
| phosphoethanolamine transferase | DI587_38330 | Not Available | - | 8145046 - 8146713 | 60772.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.