Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carnitine dehydratase | APR51_01250 | Not Available | + | 255841 - 257319 | 53318.6 |
| phosphonopyruvate decarboxylase | APR51_01255 | Not Available | + | 257365 - 257883 | 18789.6 |
| aldehyde dehydrogenase | APR51_01260 | Not Available | + | 257892 - 258497 | 21153.5 |
| carbonate dehydratase | APR51_01265 | Not Available | + | 258520 - 259212 | 25423.4 |
| hypothetical protein | APR51_01270 | Not Available | + | 259304 - 260308 | 34522.1 |
| feruloyl esterase | APR51_01275 | Not Available | - | 260468 - 262315 | 62746.3 |
| nad-dependent dehydratase | APR51_01280 | A1CTL5 | - | 262510 - 263154 | 22634.7 |
| diguanylate cyclase | APR51_01285 | Not Available | - | 263200 - 266220 | 110558.0 |
| abc transporter substrate-binding protein | APR51_01290 | Not Available | - | 266217 - 267278 | 38180.2 |
| dna-binding protein | APR51_01300 | O69717 | + | 269385 - 269852 | 17244.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.