Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR51_01200 | Not Available | + | 245473 - 246174 | 25077.9 |
| hypothetical protein | APR51_01205 | Not Available | + | 246191 - 246643 | 16172.6 |
| acyl-coa dehydrogenase | APR51_01210 | A9WC41 | + | 246746 - 247600 | 31417.5 |
| acyl-coa dehydrogenase | APR51_01215 | Q2LQN9 | + | 247623 - 248786 | 43259.6 |
| coa-transferase | APR51_01220 | Not Available | + | 248792 - 249988 | 43175.5 |
| 2-methylcitrate dehydratase | APR51_01225 | Not Available | + | 250002 - 251378 | 48120.1 |
| lysr family transcriptional regulator | APR51_01230 | Q3MCB5 | + | 251425 - 252351 | 33731.4 |
| aldolase | APR51_01235 | Q9RUZ0 | - | 252401 - 253243 | 29747.9 |
| aminotransferase | APR51_01240 | A0R5R7 | + | 253496 - 254806 | 46990.7 |
| abc transporter substrate-binding protein | APR51_01245 | Not Available | + | 254803 - 255723 | 32750.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.