Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR51_01150 | Not Available | - | 236353 - 237006 | 21991.6 |
| hypothetical protein | APR51_01155 | Not Available | - | 237003 - 237713 | 25612.9 |
| chitin deacetylase | APR51_01160 | Not Available | - | 237710 - 238624 | 34417.0 |
| abc transporter permease | APR51_01165 | Not Available | - | 238639 - 239433 | 28265.6 |
| abc transporter permease | APR51_01170 | Not Available | - | 239430 - 240284 | 30142.9 |
| spermidine/putrescine abc transporter atp-binding protein | APR51_01175 | Not Available | - | 240293 - 241384 | 38589.5 |
| hypothetical protein | APR51_01180 | P44731 | - | 241395 - 242435 | 37140.5 |
| damage-inducible protein dinb | APR51_01185 | Not Available | - | 242611 - 243120 | 18515.7 |
| abc transporter atp-binding protein | APR51_01190 | Q5YU15 | + | 243349 - 244389 | 37443.9 |
| lysr family transcriptional regulator | APR51_01195 | Not Available | + | 244466 - 245461 | 37139.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.