Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR51_00950 | Not Available | + | 195509 - 195826 | 11873.3 |
| hypothetical protein | APR51_00955 | Q0K020 | + | 196135 - 196872 | 25972.6 |
| circadian clock protein kaic | APR51_00960 | P73860 | + | 197038 - 198528 | 53526.9 |
| histidine kinase | APR51_00965 | P0DOA0 | + | 198539 - 200254 | 61239.3 |
| cupin | APR51_00970 | Not Available | + | 200312 - 201340 | 37295.6 |
| alkylhydroperoxidase | APR51_00975 | Not Available | + | 201402 - 201986 | 20084.0 |
| acyl-coa dehydrogenase | APR51_00980 | Not Available | + | 201976 - 203052 | 37682.9 |
| abc transporter atp-binding protein | APR51_00985 | Q39LW7 | + | 203070 - 203912 | 30280.8 |
| abc transporter substrate-binding protein | APR51_00990 | Q44292 | + | 203909 - 205171 | 45321.5 |
| abc transporter permease | APR51_00995 | Q55106 | + | 205173 - 205919 | 26668.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.