Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein | APR51_00750 | Not Available | + | 152871 - 153776 | 30735.6 |
| 2-hydroxy-acid oxidase | APR51_00755 | Not Available | - | 153868 - 155292 | 50590.6 |
| damage-inducible protein dinb | APR51_00760 | Not Available | + | 155504 - 156013 | 18383.6 |
| cobalamin adenosyltransferase | APR51_00765 | Q1LJ80 | + | 156027 - 156608 | 20894.0 |
| hypothetical protein | APR51_00770 | Not Available | + | 156640 - 157002 | 12311.8 |
| gdsl family lipase | APR51_00775 | Q9HZY8 | - | 157016 - 157654 | 22200.7 |
| hypothetical protein | APR51_00780 | Not Available | - | 157781 - 158197 | 14847.4 |
| hxlr family transcriptional regulator | APR51_00785 | Not Available | - | 158288 - 158716 | 15789.2 |
| deaminase | APR51_00790 | Not Available | + | 158860 - 159456 | 22033.2 |
| hypothetical protein | APR51_00795 | Not Available | + | 159610 - 160017 | 14899.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.