Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1,2-oxophytodienoate reductase | APR51_00700 | P77258 | - | 143407 - 144510 | 39244.3 |
| glutathione s-transferase | APR51_00705 | P15214 | - | 144728 - 145336 | 22414.9 |
| hypothetical protein | APR51_00710 | Not Available | + | 145514 - 145699 | 6044.98 |
| transglutaminase | APR51_00715 | Not Available | + | 145877 - 146761 | 32153.4 |
| trna uridine 5-carboxymethylaminomethyl modification protein | APR51_00720 | C5CW10 | + | 146932 - 148884 | 71440.2 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | APR51_00725 | B9M9W4 | + | 148881 - 149519 | 22821.8 |
| lysine transporter lyse | APR51_00730 | A8A0Z3 | + | 149667 - 150281 | 21510.1 |
| chromosome partitioning protein | APR51_00735 | P0A149 | + | 150291 - 151208 | 32338.1 |
| alpha/beta hydrolase | APR51_00740 | Not Available | + | 151251 - 151799 | 20270.9 |
| chromosome partitioning protein parb | APR51_00745 | P0A151 | + | 151799 - 152761 | 34271.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.