Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtpase | APR51_00290 | Not Available | - | 53106 - 54080 | 33646.6 |
| two-component system response regulator | APR51_00295 | Not Available | + | 54641 - 55447 | 29318.3 |
| histidine kinase | APR51_00300 | Not Available | + | 55444 - 56892 | 53653.6 |
| hypothetical protein | APR51_00305 | Not Available | - | 56894 - 57505 | 23120.1 |
| penicillin-binding protein | APR51_00310 | Not Available | - | 57586 - 59970 | 86734.4 |
| beta-hexosaminidase | APR51_00315 | Not Available | - | 59984 - 61300 | 47559.4 |
| hypothetical protein | APR51_00320 | Not Available | - | 61297 - 62745 | 51969.4 |
| trypsin | APR51_00325 | Not Available | + | 62933 - 65005 | 75005.8 |
| exosortase | APR51_00330 | Not Available | + | 65022 - 65957 | 32679.8 |
| hypothetical protein | APR51_00335 | Not Available | + | 65962 - 66528 | 21279.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.