Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | APR51_00195 | Not Available | - | 35968 - 36606 | 22821.8 |
| trna uridine 5-carboxymethylaminomethyl modification protein | APR51_00200 | Not Available | - | 36603 - 38555 | 71440.2 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 39201 - 39529 | Not Available |
| transglutaminase | APR51_00205 | Not Available | - | 38726 - 39610 | 32153.4 |
| hypothetical protein | APR51_00210 | Not Available | - | 39788 - 39973 | 6044.98 |
| glutathione s-transferase | APR51_00215 | Not Available | + | 40151 - 40759 | 22414.9 |
| 1,2-oxophytodienoate reductase | APR51_00220 | Not Available | + | 40977 - 42080 | 39244.3 |
| hypothetical protein | APR51_00225 | Not Available | + | 42126 - 42611 | 17023.7 |
| gcn5 family acetyltransferase | APR51_00230 | Not Available | + | 42608 - 43090 | 17946.6 |
| hypothetical protein | APR51_00235 | Not Available | + | 43087 - 43497 | 15145.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.