Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase | APR51_04630 | Not Available | + | 994598 - 996016 | 49627.1 |
| 3-isopropylmalate dehydratase | APR51_04635 | Not Available | + | 996019 - 996645 | 22772.2 |
| receptor | APR51_04640 | Not Available | + | 996665 - 997648 | 34752.9 |
| prpf protein | APR51_04645 | Not Available | + | 997653 - 998834 | 40688.1 |
| hypothetical protein | APR51_04650 | Not Available | + | 998876 - 999874 | 34582.6 |
| hypothetical protein | APR51_04655 | Q0QLE6 | + | 999878 - 1001014 | 39447.6 |
| arac family transcriptional regulator | APR51_04660 | Not Available | - | 1001024 - 1001950 | 33332.2 |
| dehydrogenase | APR51_04665 | Q9N126 | + | 1002052 - 1002804 | 27094.5 |
| hypothetical protein | APR51_04670 | Not Available | + | 1003127 - 1003309 | 6077.55 |
| hypothetical protein | APR51_04675 | A0A1P8B760 | - | 1003327 - 1004688 | 47920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.