Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation pathway signal protein | APR51_04480 | Not Available | + | 951504 - 952493 | 34226.7 |
| sodium:proton antiporter | APR51_04485 | Not Available | - | 952654 - 953604 | 32876.2 |
| hypothetical protein | APR51_04490 | Not Available | - | 953648 - 954214 | 20819.7 |
| hypothetical protein | APR51_04495 | Not Available | - | 954226 - 967476 | 450239.0 |
| hypothetical protein | APR51_04500 | Not Available | - | 967767 - 968750 | 36106.9 |
| hypothetical protein | APR51_04505 | Not Available | - | 968882 - 969376 | 18606.6 |
| hypothetical protein | APR51_04510 | Not Available | - | 969390 - 969929 | 19195.2 |
| hypothetical protein | APR51_04515 | P35482 | - | 971799 - 972941 | 38806.0 |
| hypothetical protein | APR51_04520 | Not Available | - | 973177 - 974358 | 39812.4 |
| type ii secretion system protein gspf | APR51_04525 | Q00513 | - | 974933 - 976135 | 43456.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.